Protein ZmOrphan89
ZmOrphan89 is a protein in the Orphans family.
Information
Orphans Name: ZmOrphan89
Species: Maize
Orphans Family: Orphans
Gene Name(Synonym):
Uniprot ID: C0HEP1
Subgenome: 2

Protein ZmOrphan89

ZmOrphan89 is a protein in the Orphans family.

Overview of domains present in v5 transcripts
PF00481
Zm00001eb393920_T001
Zm00001eb393920_T002

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d047385DAPseq no logo sequence fimo position
Zm00001d047385DAPseq no logo sequence fimo position
Zm00001d047385ChIPseq no logo sequence fimo position
Zm00001d047385PChIPseq no logo sequence fimo position

Interactions where ZmOrphan89 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmOrphan89 is the target  
Expand


There are 74 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb393920_T001 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MDYLKSCWGPASPAGRPRKGSDATGRQDGLLWYKDGGQVVDGEFSMAVVQANNLLEDHSQVESGPLSTSEPGLQGTFVGV
YDGHGGPETARYINDHLFNHLRRFASEHKCMSADVIRKAFRATEEGFISVVSNQWSLRPQLAAVGSCCLVGVVCSGTLYV
ANLGDSRAVLGRLVKGTGEVLAMQLSAEHNASYEEVRRELQASHPDDPHIVVLKHNVWRVKGIIQITRSIGDVYLKKPEF
NREPLHSKFRLQETFRRPLLSSDPAITVHQIQPTDKFIIFASDGLWEHLSNQEVVDMVQSSPRNGIARKLVKSAVQEAAK
KREMRYSDLKKVDRGVRRHFHDDITVIVVFFDSNAMTTAAWSRPSVSLRGGGFPIHSNTLAPFSVPTELNNSY

MDYLKSCWGPASPAGRPRKGSDATGRQDGLLWYKDGGQVVDGEFSMAVVQANNLLEDHSQVESGPLSTSEPGLQGTFVGV
YDGHGGPETARYINDHLFNHLRRFASEHKCMSADVIRKAFRATEEGFISVVSNQWSLRPQLAAVGSCCLVGVVCSGTLYV
ANLGDSRAVLGRLVKGTGEVLAMQLSAEHNASYEEVRRELQASHPDDPHIVVLKHNVWRVKGIIQITRSIGDVYLKKPEF
NREPLHSKFRLQETFRRPLLSSDPAITVHQIQPTDKFIIFASDGLWEHLSNQEVVDMVQSSPRNGIARKLVKSAVQEAAK
KREMRYSDLKKVDRGVRRHFHDDITVIVVFFDSNAMTTAAWSRPSVSLRGGGFPIHSNTLAPFSVPTELNNSY

MDYLKSCWGPASPAGRPRKGSDATGRQDGLLWYKDGGQVVDGEFSMAVVQANNLLEDHSQVESGPLSTSEPGLQGTFVGV
YDGHGGPETARYINDHLFNHLRRFASEHKCMSADVIRKAFRATEEGFISVVSNQWSLRPQLAAVGSCCLVGVVCSGTLYV
ANLGDSRAVLGRLVKGTGEVLAMQLSAEHNASYEEVRRELQASHPDDPHIVVLKHNVWRVKGIIQITRSIGDVYLKKPEF
NREPLHSKFRLQETFRRPLLSSDPAITVHQIQPTDKFIIFASDGLWEHLSNQEVVDMVQSSPRNGIARKLVKSAVQEAAK
KREMRYSDLKKVDRGVRRHFHDDITVIVVFFDSNAMTTAAWSRPSVSLRGGGFPIHSNTLAPFSVPTELNNSY

MDYLKSCWGPASPAGRPRKGSDATGRQDGLLWYKDGGQVVDGEFSMAVVQANNLLEDHSQVESGPLSTSEPGLQGTFVGV
YDGHGGPETARYINDHLFNHLRRFASEHKCMSADVIRKAFRATEEGFISVVSNQWSLRPQLAAVGSCCLVGVVCSGTLYV
ANLGDSRAVLGRLVKGTGEVLAMQLSAEHNASYEEVRRELQASHPDDPHIVVLKHNVWRVKGIIQITRSIGDVYLKKPEF
NREPLHSKFRLQETFRRPLLSSDPAITVHQIQPTDKFIIFASDGLWEHLSNQEVVDMVQSSPRNGIARKLVKSAVQEAAK
KREMRYSDLKKVDRGVRRHFHDDITVIVVFFDSNAMTTAAWSRPSVSLRGGGFPIHSNTLAPFSVPTELNNSY

MDYLKSCWGPASPAGRPRKGSDATGRQDGLLWYKDGGQVVDGEFSMAVVQANNLLEDHSQVESGPLSTSEPGLQGTFVGV
YDGHGGPETARYINDHLFNHLRRFASEHKCMSADVIRKAFRATEEGFISVVSNQWSLRPQLAAVGSCCLVGVVCSGTLYV
ANLGDSRAVLGRLVKGTGEVLAMQLSAEHNASYEEVRRELQASHPDDPHIVVLKHNVWRVKGIIQITRSIGDVYLKKPEF
NREPLHSKFRLQETFRRPLLSSDPAITVHQIQPTDKFIIFASDGLWEHLSNQEVVDMVQSSPRNGIARKLVKSAVQEAAK
KREMRYSDLKKVDRGVRRHFHDDITVIVVFFDSNAMTTAAWSRPSVSLRGGGFPIHSNTLAPFSVPTELNNSY

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00481
Hover here to show all domains

Nucleotide Sequence
Copy to clipboard
     
Expand

AAAATTTGGAAGGGGAATGGTCGGA...

GRMZM2G108309_T01 from maize genome v3


Related TFome: pUT6495

Amino Acid Sequence
Copy to clipboard

MLSALMDYLKSCWGPASPAGRPRKGSDATGRQDGLLWYKDGGQVVDGEFSMAVVQANNLLEDHSQVESGPLSTSEPGLQG
TFVGVYDGHGGPETARYINDHLFNHLRRFASEHKCMSADVIRKAFRATEEGFISVVSNQWSLRPQLAAVGSCCLVGVVCS
GTLYVANLGDSRAVLGRLVKGTGEVLAMQLSAEHNASYEEVRRELQASHPDDPHIVVLKHNVWRVKGIIQITRSIGDVYL
KKPEFNREPLHSKFRLQETFRRPLLSSDPAITVHQIQPTDKFIIFASDGLWEHLSNQEVVDMVQSSPRNGIARKLVKSAV
QEAAKKREMRYSDLKKVDRGVRRHFHDDITVIVVFFDSNAMTTAAWSRPSVSLRGGGFPIHSNTLAPFSVPTELNNSY

Nucleotide Sequence
Copy to clipboard
     
Expand

AAAATTTGGAAGGGGAATGGTCGGA...

GRMZM2G108309_T02 from maize genome v3

Amino Acid Sequence
Copy to clipboard

MLSALMDYLKSCWGPASPAGRPRKGSDATGRQDGLLWYKDGGQVVDGEFSMAVVQANNLLEDHSQVESGPLSTSEPGLQG
TFVGVYDGHGGPETARYINDHLFNHLRSKASTAVEVHALDQTVAIKLCYRIYNRYI

Nucleotide Sequence
Copy to clipboard
     
Expand

AAAATTTGGAAGGGGAATGGTCGGA...

Zm00001d047385_T001 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MLSALMDYLKSCWGPASPAGRPRKGSDATGRQDGLLWYKDGGQVVDGEFSMAVVQANNLLEDHSQVESGPLSTSEPGLQG
TFVGVYDGHGGPETARYINDHLFNHLRRFASEHKCMSADVIRKAFRATEEGFISVVSNQWSLRPQLAAVGSCCLVGVVCS
GTLYVANLGDSRAVLGRLVKGTGEVLAMQLSAEHNASYEEVRRELQASHPDDPHIVVLKHNVWRVKGIIQVN

Nucleotide Sequence
Copy to clipboard
     
Expand

GGAAGGGGAATGGTCGGAGAGAGAA...

Zm00001d047385_T002 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MLSALMDYLKSCWGPASPAGRPRKGSDATGRQDGLLWYKDGGQVVDGEFSMAVVQANNLLEDHSQVESGPLSTSEPGLQG
TFVGVYDGHGGPETARYINDHLFNHLRRFASEHKCMSADVIRKAFRATEEGFISVVSNQWSLRPQLAAVGSCCLVGVVCS
GTLYVANLGDSRAVLGRLVKGTGEVLAMQLSAEHNASYEEVRRELQASHPDDPHIVVLKHNVWRVKGIIQITRSIGDVYL
KKPEFNREPLHSKFRLQETFRRPLLSSDPAITVHQIQPTDKFIIFASDGLWEHLSNQEVVDMVQSSPRNGIARKLVKSAV
QEAAKKREMRYSDLKKVDRGVRRHFHDDITVIVVFFDSNAMTTAAWSRPSVSLRGGGFPIHSNTLAPFSVPTELNNSY

Nucleotide Sequence
Copy to clipboard
     
Expand

GGAAGGGGAATGGTCGGAGAGAGAA...

Zm00001d047385_T003 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MLSALMDYLKSCWGPASPAGRPRKGSDATGRQDGLLWYKDGGQVVDGEFSMAVVQANNLLEDHSQVESGPLSTSEPGLQG
TFVGVYDGHGGPETARYINDHLFNHLRRFASEHKCMSADVIRKAFRATEEGFISVVSNQWSLRPQLAAVGSCCLVGVVCS
GTLYVANLGDSRAVLGRLVKGTGEVLAMQLSAEHNASYEEVRRELQASHPDDPHIVVLKHNVWRVKGIIQVN

Nucleotide Sequence
Copy to clipboard
     
Expand

GGAGAGAGAAAGCTTCCTCCCTCTT...

Zm00001d047385_T004 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MLSALMDYLKSCWGPASPAGRPRKGSDATGRQDGLLWYKDGGQVVDGEFSMAVVQANNLLEDHSQVESGPLSTSEPGLQG
TFVGVYDGHGGPETARYINDHLFNHLRRFASEHKCMSADVIRKAFRATEEGFISVVSNQWSLRPQLAAVGSCCLVGVVCS
GTLYVANLGDSRAVLGRLVKGTGEVLAMQLSAEHNASYEEVRRELQASHPDDPHIVVLKHNVWRVKGIIQITRSIGDVYL
KKPEFNREPLHSKFRLQETFRRPLLSSDPAITVHQIQPTDKFIIFASDGLWEHLSNQEVVDMVQSSPRNGIARKLVKSAV
QEAAKKREMRYSDLKKVDRGVRRHFHDDITVIVVFFDSNAMTTAAWSRPSVSLRGGGFPIHSNTLAPFSVPTELNNSY

Nucleotide Sequence
Copy to clipboard
     
Expand

GGAGAGAGAAAGCTTCCTCCCTCTT...

Zm00001d047385_T005 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MLSALMDYLKSCWGPASPAGRPRKGSDATGRQDGLLWYKDGGQVVDGEFSMAVVQANNLLEDHSQVESGPLSTSEPGLQG
TFVGVYDGHGGPETARYINDHLFNHLRRFASEHKCMSADVIRKAFRATEEGFISVVSNQWSLRPQLAAVGSCCLVGVVCS
GTLYVANLGDSRAVLGRLVKGTGEVLAMQLSAEHNASYEEVRRELQASHPDDPHIVVLKHNVWRVKGIIQVN

Nucleotide Sequence
Copy to clipboard
     
Expand

GCTTCTCCTGTAGCTGTAATTTTTG...

Zm00001d047385_T006 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MLSALMDYLKSCWGPASPAGRPRKGSDATGRQDGLLWYKDGGQVVDGEFSMAVVQANNLLEDHSQVESGPLSTSEPGLQG
TFVGVYDGHGGPETARYINDHLFNHLRRFASEHKCMSADVIRKAFRATEEGFISVVSNQWSLRPQLAAVGSCCLVGVVCS
GTLYVANLGDSRAVLGRLVKGTGEVLAMQLSAEHNASYEEVRRELQASHPDDPHIVVLKHNVWRVKGIIQVN

Nucleotide Sequence
Copy to clipboard
     
Expand

GCTTCTCCTGTAGCTGTAATTTTTG...

Zm00001d047385_T007 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MLSALMDYLKSCWGPASPAGRPRKGSDATGRQDGLLWYKDGGQVVDGEFSMAVVQANNLLEDHSQVESGPLSTSEPGLQG
TFVGVYDGHGGPETARYINDHLFNHLRRFASEHKCMSADVIRKAFRATEEGFISVVSNQWSLRPQLAAVGSCCLVGVVCS
GTLYVANLGDSRAVLGRLVKGTGEVLAMQLSAEHNASYEEVRRELQASHPDDPHIVVLKHNVWRVKGIIQVN

Nucleotide Sequence
Copy to clipboard
     
Expand

TCTCCTGTAGCTGTAATTTTTGAGA...

Zm00001d047385_T009 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MAVVQANNLLEDHSQVESGPLSTSEPGLQGTFVGVYDGHGGPETARYINDHLFNHLRRFASEHKCMSADVIRKAFRATEE
GFISVVSNQWSLRPQLAAVGSCCLVGVVCSGTLYVANLGDSRAVLGRLVKGTGEVLAMQLSAEHNASYEEVRRELQASHP
DDPHIVVLKHNVWRVKGIIQITRSIGDVYLKKPEFNREPLHSKFRLQETFRRPLLSSDPAITVHQIQPTDKFIIFASDGL
WEHLSNQEVVDMVQSSPRNVCILILCSVSVTWSF

Nucleotide Sequence
Copy to clipboard
     
Expand

ACGGCGGGCAGGTCGTCGATGGTGA...

Zm00001d047385_T010 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MRLHLTCYDHVLQITRSIGDVYLKKPEFNREPLHSKFRLQETFRRPLLSSDPAITVHQIQPTDKFIIFASDGLWEHLSNQ
EVVDMVQSSPRNGIARKLVKSAVQEAAKKREMRYSDLKKVDRGVRRHFHDDITVIVVFFDSNAMTTAAWSRPSVSLRGGG
FPIHSNTLAPFSVPTELNNSY

Nucleotide Sequence
Copy to clipboard
     
Expand

ATGAGGTTGCATCTCACATGCTATG...

Zm00001eb393920_T002 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MDYLKSCWGPASPAGRPRKGSDATGRQDGLLWYKDGGQVVDGEFSMAVVQANNLLEDHSQVESGPLSTSEPGLQGTFVGV
YDGHGGPETARYINDHLFNHLRRFASEHKCMSADVIRKAFRATEEGFISVITRSIGDVYLKKPEFNREPLHSKFRLQETF
RRPLLSSDPAITVHQIQPTDKFIIFASDGLWEHLSNQEVVDMVQSSPRNGIARKLVKSAVQEAAKKREMRYSDLKKVDRG
VRRHFHDDITVIVVFFDSNAMTTAAWSRPSVSLRGGGFPIHSNTLAPFSVPTELNNSY

Nucleotide Sequence
Copy to clipboard
     
Expand

AAAATTTGGAAGGGGAATGGTCGGA...


Copyright © 2023 Grassius.org | Last updated: 2023-06-26